2025-06-13 13:51:35.383 | INFO | climate_ref_core.logging:redirect_logs:195 - Running definition ExecutionDefinition( diagnostic=GlobalMeanTimeseries(name='Global Mean Timeseries'), key='cmip6_CMIP6.CMIP.NCC.NorESM2-LM.historical.r1i1p1f1.Amon.tas.gn.v20190815', datasets=, output_directory=PosixPath('/nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde'), _root_directory=PosixPath('/nird/scratch/yanchun/diagnostics/climate-ref/scratch') ) 2025-06-13 13:51:35.384 | INFO | pooch.core:fetch:578 - Downloading file 'examples/recipe_python.yml' from 'https://raw.githubusercontent.com/ESMValGroup/ESMValTool/58fd0b8ece981bc97c4fbd213b11f2228d90db28/esmvaltool/recipes/examples/recipe_python.yml' to '/nird/home/yanchun/.cache/climate_ref_esmvaltool'. 2025-06-13 13:51:35.674 | INFO | climate_ref_core.providers:create_env:346 - Environment at /nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d already exists, skipping. 2025-06-13 13:51:35.675 | INFO | climate_ref_core.providers:run:402 - Running '/nird/datalake/NS16000B/climate-ref-software/conda/micromamba run --prefix /nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d esmvaltool run --config-dir=/nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/config /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/recipe.yml' 2025-06-13 13:51:49.760 | INFO | climate_ref_core.providers:run:413 - Command output: 2025-06-13 11:51:38,159 UTC [3520475] INFO ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ Earth System Model Evaluation Tool A community tool for the evaluation of Earth system models. https://esmvaltool.org The Earth System Model Evaluation Tool (ESMValTool) is a community diagnostics and performance metrics tool for the evaluation of Earth System Models (ESMs) that allows for routine comparison of single or multiple models, either against predecessor versions or against observations. Tutorial: https://tutorial.esmvaltool.org Documentation: https://docs.esmvaltool.org Contact: esmvaltool-dev@listserv.dfn.de If you find this software useful for your research, please cite it using https://doi.org/10.5281/zenodo.3387139 for ESMValCore or https://doi.org/10.5281/zenodo.3401363 for ESMValTool or any of the reference papers listed at https://esmvaltool.org/references/. Have fun! 2025-06-13 11:51:38,160 UTC [3520475] INFO Package versions 2025-06-13 11:51:38,160 UTC [3520475] INFO ---------------- 2025-06-13 11:51:38,160 UTC [3520475] INFO ESMValCore: 2.12.0 2025-06-13 11:51:38,160 UTC [3520475] INFO ESMValTool: 2.13.0.dev65+g58fd0b8ec 2025-06-13 11:51:38,160 UTC [3520475] INFO ---------------- 2025-06-13 11:51:38,160 UTC [3520475] INFO Reading configuration files from: /nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d/lib/python3.12/site-packages/esmvalcore/config/configurations/defaults (defaults) /nird/home/yanchun/.config/esmvaltool (default user configuration directory) /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/config (command line argument) 2025-06-13 11:51:38,160 UTC [3520475] INFO Writing program log files to: /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/main_log.txt /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/main_log_debug.txt /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/cmor_log.txt 2025-06-13 11:51:38,371 UTC [3520475] WARNING /nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d/lib/python3.12/site-packages/esmpy/interface/loadESMF.py:94: VersionWarning: ESMF installation version 8.8.0, ESMPy version 8.8.0b0 warnings.warn("ESMF installation version {}, ESMPy version {}".format( 2025-06-13 11:51:38,437 UTC [3520475] INFO Starting the Earth System Model Evaluation Tool at time: 2025-06-13 11:51:38 UTC 2025-06-13 11:51:38,438 UTC [3520475] INFO ---------------------------------------------------------------------- 2025-06-13 11:51:38,438 UTC [3520475] INFO RECIPE = /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/recipe.yml 2025-06-13 11:51:38,438 UTC [3520475] INFO RUNDIR = /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run 2025-06-13 11:51:38,439 UTC [3520475] INFO WORKDIR = /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/work 2025-06-13 11:51:38,439 UTC [3520475] INFO PREPROCDIR = /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/preproc 2025-06-13 11:51:38,439 UTC [3520475] INFO PLOTDIR = /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/plots 2025-06-13 11:51:38,441 UTC [3520475] INFO ---------------------------------------------------------------------- 2025-06-13 11:51:38,441 UTC [3520475] INFO Running tasks using at most 255 processes 2025-06-13 11:51:38,441 UTC [3520475] INFO If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2025-06-13 11:51:38,441 UTC [3520475] INFO If you experience memory problems, try reducing 'max_parallel_tasks' in your configuration. 2025-06-13 11:51:38,455 UTC [3520475] INFO For Dataset: tas, Amon, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gn, supplementaries: areacella, *, *, *, *: ignoring supplementary variable 'areacella', unable to expand wildcards 'activity', 'ensemble', 'institute', 'exp', 'mip'. 2025-06-13 11:51:38,456 UTC [3520475] INFO Creating tasks from recipe 2025-06-13 11:51:38,456 UTC [3520475] INFO Creating tasks for diagnostic timeseries 2025-06-13 11:51:38,456 UTC [3520475] INFO Creating diagnostic task timeseries/script1 2025-06-13 11:51:38,479 UTC [3520475] INFO Creating preprocessor task timeseries/tas 2025-06-13 11:51:38,479 UTC [3520475] INFO Creating preprocessor 'annual_mean_global' task for variable 'tas' 2025-06-13 11:51:38,484 UTC [3520475] WARNING Preprocessor function area_statistics works best when at least one supplementary variable of ['areacella', 'areacello'] is defined in the recipe for Dataset: {'diagnostic': 'timeseries', 'variable_group': 'tas', 'dataset': 'NorESM2-LM', 'project': 'CMIP6', 'mip': 'Amon', 'short_name': 'tas', 'activity': 'CMIP', 'alias': 'NorESM2-LM', 'caption': 'Annual global mean {long_name} according to {dataset}.', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'frequency': 'mon', 'grid': 'gn', 'institute': 'NCC', 'long_name': 'Near-Surface Air Temperature', 'modeling_realm': ['atmos'], 'original_short_name': 'tas', 'preprocessor': 'annual_mean_global', 'recipe_dataset_index': 0, 'standard_name': 'air_temperature', 'timerange': '18500116T120000/20141216T120000', 'units': 'K'} session: 'recipe_20250613_115138'. 2025-06-13 11:51:38,491 UTC [3520475] INFO Found input files for Dataset: tas, Amon, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gn, v20190815 2025-06-13 11:51:38,492 UTC [3520475] INFO PreprocessingTask timeseries/tas created. 2025-06-13 11:51:38,492 UTC [3520475] INFO These tasks will be executed: timeseries/script1, timeseries/tas 2025-06-13 11:51:38,496 UTC [3520475] INFO Wrote recipe with version numbers and wildcards to: file:///nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/recipe_filled.yml 2025-06-13 11:51:38,496 UTC [3520475] INFO Using Dask threaded scheduler. The distributed scheduler is recommended, please read https://docs.esmvaltool.org/projects/ESMValCore/en/latest/quickstart/configure.html#dask-configuration how to use a distributed scheduler. 2025-06-13 11:51:38,496 UTC [3520475] INFO Running 2 tasks using 2 processes 2025-06-13 11:51:38,496 UTC [3520475] INFO Using the threaded Dask scheduler with 239 worker threads per preprocessing task. See https://docs.esmvaltool.org/projects/ESMValCore/en/latest/quickstart/configure.html#f5 for more information. 2025-06-13 11:51:38,529 UTC [3520629] INFO Starting task timeseries/tas in process [3520629] 2025-06-13 11:51:38,627 UTC [3520475] INFO Progress: 1 tasks running, 1 tasks waiting for ancestors, 0/2 done 2025-06-13 11:51:40,512 UTC [3520629] INFO Computing and saving data for preprocessing task timeseries/tas 2025-06-13 11:51:41,515 UTC [3520629] INFO timeseries/tas [########################################] | 100% Completed | 1.00 s 2025-06-13 11:51:41,518 UTC [3520629] INFO Successfully completed task timeseries/tas (priority 1) in 0:00:02.988510 2025-06-13 11:51:41,529 UTC [3520475] INFO Progress: 0 tasks running, 1 tasks waiting for ancestors, 1/2 done 2025-06-13 11:51:41,538 UTC [3520630] INFO Starting task timeseries/script1 in process [3520630] 2025-06-13 11:51:41,540 UTC [3520630] INFO Running command ['/nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d/bin/python', '/nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d/lib/python3.12/site-packages/esmvaltool/diag_scripts/examples/diagnostic.py', '/nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/timeseries/script1/settings.yml'] 2025-06-13 11:51:41,541 UTC [3520630] INFO Writing output to /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/work/timeseries/script1 2025-06-13 11:51:41,541 UTC [3520630] INFO Writing plots to /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/plots/timeseries/script1 2025-06-13 11:51:41,541 UTC [3520630] INFO Writing log to /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/timeseries/script1/log.txt 2025-06-13 11:51:41,541 UTC [3520630] INFO To re-run this diagnostic script, run: cd /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/timeseries/script1; MPLBACKEND="Agg" /nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d/bin/python /nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d/lib/python3.12/site-packages/esmvaltool/diag_scripts/examples/diagnostic.py /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/timeseries/script1/settings.yml 2025-06-13 11:51:41,631 UTC [3520475] INFO Progress: 1 tasks running, 0 tasks waiting for ancestors, 1/2 done 2025-06-13 11:51:47,595 UTC [3520630] INFO Maximum memory used (estimate): 0.3 GB 2025-06-13 11:51:47,596 UTC [3520630] INFO Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2025-06-13 11:51:48,271 UTC [3520630] INFO Successfully completed task timeseries/script1 (priority 0) in 0:00:06.732743 2025-06-13 11:51:48,336 UTC [3520475] INFO Progress: 0 tasks running, 0 tasks waiting for ancestors, 2/2 done 2025-06-13 11:51:48,337 UTC [3520475] INFO Successfully completed all tasks. 2025-06-13 11:51:48,378 UTC [3520475] INFO Wrote recipe with version numbers and wildcards to: file:///nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/run/recipe_filled.yml 2025-06-13 11:51:49,241 UTC [3520475] INFO Wrote recipe output to: file:///nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138/index.html 2025-06-13 11:51:49,241 UTC [3520475] INFO It looks like you are connected to a remote machine via SSH. To show the output html file, you can try the following command on your local machine: server=10.11.6.71 && port=31415 && ssh -t -L ${port}:localhost:${port} yanchun@${server} /nird/datalake/NS16000B/climate-ref-software/conda/esmvaltool-9776cff81b525ef5fc839c1b70ccfa40943cee1d/bin/python -m http.server ${port} -d /nird/scratch/yanchun/diagnostics/climate-ref/scratch/esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde/executions/recipe_20250613_115138 Then visit http://localhost:31415 in your browser 2025-06-13 11:51:49,241 UTC [3520475] INFO If the port 31415 is already in use, you can replace it with any other free one (e.g., 12789). If you are connected through a jump host, replace the server IP address 10.11.6.71 with your SSH server name 2025-06-13 11:51:49,241 UTC [3520475] INFO Ending the Earth System Model Evaluation Tool at time: 2025-06-13 11:51:49 UTC 2025-06-13 11:51:49,241 UTC [3520475] INFO Time for running the recipe was: 0:00:10.804076 2025-06-13 11:51:49,245 UTC [3520475] INFO Maximum memory used (estimate): 2.0 GB 2025-06-13 11:51:49,246 UTC [3520475] INFO Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2025-06-13 11:51:49,246 UTC [3520475] INFO Removing `preproc` directory containing preprocessed data 2025-06-13 11:51:49,247 UTC [3520475] INFO If this data is further needed, then set `remove_preproc_dir` to `false` in your configuration 2025-06-13 11:51:49,248 UTC [3520475] INFO Run was successful 2025-06-13 13:51:49.763 | INFO | climate_ref_core.providers:run:414 - Command execution successful 2025-06-13 13:51:49.768 | INFO | climate_ref_core.logging:redirect_logs:202 - Diagnostic execution complete. Results available in esmvaltool/global-mean-timeseries/cf47fddccc600e3250a520994d3b3b45bf796fde